.. AssemblyTron documentation master file, created by
   sphinx-quickstart on Tue Dec 12 23:55:42 2023.
   You can adapt this file completely to your liking, but it should at least
   contain the root `toctree` directive.

Welcome to AssemblyTron's documentation!
========================================

.. include:: src.AssemblyTron.j5_to_csvs
.. include:: src.AssemblyTron.j5_to_csvs_digests
.. include:: src.AssemblyTron.opentrons_demo_script
.. include:: src.AssemblyTron.pathswriter
.. include:: src.AssemblyTron.Update_Input
.. include:: src.AssemblyTron.static_wired_IP_address
.. include:: src.AssemblyTron

.. include:: src.AssemblyTron.Golden_Gate.dilution_24_digests_writer
.. include:: src.AssemblyTron.Golden_Gate.dilution_24_writer
.. include:: src.AssemblyTron.Golden_Gate.dilution_96_writer
.. include:: src.AssemblyTron.Golden_Gate.GoldenGate_digests_separatepcrruns_gradient_writer
.. include:: src.AssemblyTron.Golden_Gate.GoldenGate_nodigests_separatepcrruns_gradient_writer
.. include:: src.AssemblyTron.Golden_Gate.Setup_digests_gradient
.. include:: src.AssemblyTron.Golden_Gate.Setup_nodigests_seppcr_gradient_24
.. include:: src.AssemblyTron.Golden_Gate.Setup_nodigests_seppcr_gradient_96
.. include:: src.AssemblyTron.Golden_Gate

.. include:: src.AssemblyTron.Cloning.dilution_24_writer
.. include:: src.AssemblyTron.Cloning.dilution_96_writer
.. include:: src.AssemblyTron.Cloning.IVA_separatepcrruns_gradient_writer
.. include:: src.AssemblyTron.Cloning.Setup_seppcr_gradient_24
.. include:: src.AssemblyTron.Cloning.Setup_seppcr_gradient_96
.. include:: src.AssemblyTron.Cloning

.. include:: src.AssemblyTron.Error_prone_PCR_Golden_Gate._1_Setup_STD_GoldenGate_digests_PCR
.. include:: src.AssemblyTron.Error_prone_PCR_Golden_Gate._1_Setup_STD_GoldenGate_PCR
.. include:: src.AssemblyTron.Error_prone_PCR_Golden_Gate.dilution_24_digests_writer
.. include:: src.AssemblyTron.Error_prone_PCR_Golden_Gate.dilution_Error_prone_PCR_writer
.. include:: src.AssemblyTron.Error_prone_PCR_Golden_Gate.Error_prone_PCR_writer
.. include:: src.AssemblyTron.Error_prone_PCR_Golden_Gate.GoldenGate_digests_separatepcrruns_gradient_writer
.. include:: src.AssemblyTron.Error_prone_PCR_Golden_Gate.GoldenGate_separatepcrruns_gradient_writer
.. include:: src.AssemblyTron.Error_prone_PCR_Golden_Gate.Setup_Error_prone_PCR
.. include:: src.AssemblyTron.Error_prone_PCR_Golden_Gate.Setup_Error_prone_PCR_NOdigest
.. include:: src.AssemblyTron.Error_prone_PCR_Golden_Gate.Setup_STD_GoldenGate_Assembly
.. include:: src.AssemblyTron.Error_prone_PCR_Golden_Gate._1_Setup_STD_GoldenGate_digests_PCR
.. include:: src.AssemblyTron.Error_prone_PCR_Golden_Gate

.. include:: src.AssemblyTron.MoClo_builder.MoClo_writer
.. include:: src.AssemblyTron.MoClo_builder.Setup_MoClo
.. include:: src.AssemblyTron.MoClo_builder



Indices and tables
==================

* :ref:`genindex`
* :ref:`modindex`
* :ref:`search`